Documentation for anRichment
(Jeremy A. Miller's and Peter Langfelder's Enrichment Functions)
Peter Langfelder, Jeremy A. Miller, Steve Horvath
Peter (dot) Langfelder (at) gmail (dot) com
Jeremym (at) alleninstitute (dot) org
SHorvath (at) mednet (dot) ucla (dot) edu
This tutorial illustrates the basic functionality of the package. It illustrates basic usage for enrichment
calculations in existing reference gene sets, creation of new gene sets, and export and import of multiple
gene sets at once. The analysis is illustrated using modules identified by Oldham et al (2008).
To run the tutorial code, please downlodad the following data necessary for the tutorial:
- Zipped tutorial data.
Download and unzip the bundle in a folder of your choice, preferrably a folder created specifically for
The tutorial text and code are contained in this PDF document: