This is a short description of the installation of the packages you can download from the main site. For more details, please take a look at the manuals provided by the R project.
The anRichment package requires the following packages to be installed: WGCNA, AnnotationDbi, GO.db, XML, the transcript DB packages TxDb.Hsapiens.UCSC.hg19.knownGene and TxDb.Mmusculus.UCSC.mm10.knownGene, and any applicable org.Xx.eg.db packages (org.Hs.eg.db and org.Mm.eg.db are mandatory dependencies). If your system does not have them installed, the easiest way to install them is to issue the following command at the R prompt:
Installation of the package is simple. Download the appropriate package file from the
download page and save it in a directory of your choice. Make sure your download
manager does not automatically uncompress the file. Run an R session as a
user with sufficient privileges to install software (see below if you don't have the requisite
privileges). At the prompt, type (replace
path/to/anRichment with the
directory and filename of the downloaded package):
The packages should be automatically unpacked and installed.
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